8–9 Oct 2026
GEOMAR - Standort Ostufer / GEOMAR - East Shore
Europe/Berlin timezone

O2A SEQUENCES: A FAIR Platform for End-to-End Metabarcoding Data Management

9 Oct 2026, 11:00
1h 30m
5-1.214 - ATLANTIK / ATLANTIC - Linke Seite – Großer, unterteilbarer Konferenzraum (GEOMAR - Standort Ostufer / GEOMAR - East Shore)

5-1.214 - ATLANTIK / ATLANTIC - Linke Seite – Großer, unterteilbarer Konferenzraum

GEOMAR - Standort Ostufer / GEOMAR - East Shore

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Speaker

Alex Savchik (Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research (AWI))

Description

Metabarcoding, the sequencing of marker genes from environmental samples to identify the or-ganisms present, is central to biodiversity and environmental research, and its data volumes are growing quickly. Turning these data into a lasting, shareable resource depends on keeping se-quences, their metadata, and analyses connected and archive-ready, which remains difficult to do consistently across groups and tools.

O2A SEQUENCES (https://sequences.o2a-data.de) provides this missing layer. Embedded in AWI's O2A (Observations to Analysis and Archives) framework, it manages raw sequences from ingestion to archive submission. Researchers upload their sequences and complete a standardized set of metadata fields aligned with the HARMONise schema (https://harmonise.awi.de), which builds on the MIxS standard. The platform runs standard, pre-configured workflows reproducibly, and it lowers the barrier to archiving by assembling raw se-quences together with their metadata into submission-ready files that follow European Nucleotide Archive (ENA) and German Federation for Biological Data (GFBio) conventions.

Offered as software-as-a-service, O2A SEQUENCES makes metabarcoding data FAIR, AI-ready, and reusable across centers, providing a foundation for sustainable research-data man-agement that extends to other environmental data types.

Authors

Alex Savchik (Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research (AWI)) Lars Harms (Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research (AWI)) Christina Bienhold (Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research (AWI)) Christiane Hassenrück (Leibniz Institute for Baltic Sea Research Warnemünde (IOW)) Katja Metfies (Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research (AWI)) Roland Koppe (Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research (AWI)) Sonja Hänzelmann (Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research (AWI))

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